PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan011342
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family HB-other
Protein Properties Length: 132aa    MW: 14538.5 Da    PI: 10.8055
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55166609PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox22.51.9e-071375656
               S--HHHHHHHHHHHHHSS..S--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS
   Homeobox  6 tftkeqleeLeelFeknr..ypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56
               +ft+ ++ e+e+  + n+   p ++    LA+k           +++ +qV +WFqNrR+  k
  Aan011342 13 RFTPPEIAEMEAILQANQiaVPERQILVSLAEKFsateerkgkmEVQMKQVWNWFQNRRYAIK 75
               58999999999999975422799999999999999999999999***************9766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003892.6E-4781IPR001356Homeobox domain
SuperFamilySSF466891.54E-101279IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-71281IPR009057Homeodomain-like
CDDcd000862.94E-61378No hitNo description
PROSITE profilePS500718.8921377IPR001356Homeobox domain
PfamPF000465.2E-51375IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MGRPPSNGGP SFRFTPPEIA EMEAILQANQ IAVPERQILV SLAEKFSATE ERKGKMEVQM  60
KQVWNWFQNR RYAIKSKQAK SPGKLDVTQM PRDNSAMVKP APQPTQPLAA STATVKTLPQ  120
APQHPTVPAA SX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006464827.15e-46PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2
RefseqXP_014620435.17e-46PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2-like isoform X2
SwissprotQ8RWJ72e-39SHH2_ARATH; Protein SAWADEE HOMEODOMAIN HOMOLOG 2
TrEMBLA0A103Y3315e-49A0A103Y331_CYNCS; Homeodomain-containing protein
STRINGGLYMA06G35561.13e-44(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.38e-41sequence-specific DNA binding transcription factors;sequence-specific DNA binding